The theoretical approach to population genetics (2018)
Journal Article
Al Ghafri, M. K. (2018). The theoretical approach to population genetics. Ology: Reviews in Applied Sciences, 1, 10-11. https://doi.org/10.14297/ras.v1i1.3

Population genetics is the study of gene variation within or between populations. It deals with the allele frequencies in a given population and the forces, which might change this. Such forces, which are known to alter and change the allele frequenc... Read More about The theoretical approach to population genetics.

The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae (2013)
Thesis
Kerr, G. The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae. (Thesis). University of Warwick. Retrieved from http://researchrepository.napier.ac.uk/Output/1596320

Meiosis is a specialised cell division that results in the formation of four genetically unique haploid daughter cells from one diploid parent cell. This is achieved by one round of DNA replication followed by two rounds of nuclear division. This is... Read More about The role of protein phosphatase PP2ACdc55 during meiosis in Saccharomyces cerevisiae.

Complete genome sequence analysis of Rhodococcus equi Phage E3 and Insight into R. equi Phage Diversity. (2011)
Thesis
Salifu, S. P. Complete genome sequence analysis of Rhodococcus equi Phage E3 and Insight into R. equi Phage Diversity. (Thesis). Edinburgh Napier University. Retrieved from http://researchrepository.napier.ac.uk/id/eprint/4841

Rhodococcus equi (R. equi) is a Gram positive, facultative and weakly acid-fast bacterium, which causes respiratory disease in foals worldwide resulting in pneumonia, often with fatal consequences. Human infections of R. equi that are resistant to an... Read More about Complete genome sequence analysis of Rhodococcus equi Phage E3 and Insight into R. equi Phage Diversity..

Identification, sequencing and molecular analysis of Chp4, a novel chlamydiaphage of Chlamydophila abortus belonging to the family Microviridae (2011)
Journal Article
Sait, M., Livingstone, M., Graham, R., Inglis, N. F., Wheelhouse, N., & Longbottom, D. (2011). Identification, sequencing and molecular analysis of Chp4, a novel chlamydiaphage of Chlamydophila abortus belonging to the family Microviridae. Journal of General Virology, 92(7), 1733-1737. https://doi.org/10.1099/vir.0.031583-0

Members of the family Microviridae have been identified in a number of chlamydial species infecting humans (phage CPAR39 in Chlamydophila pneumoniae), other mammals (phiCPG1 in Chlamydophila caviae, Chp2 in Chlamydophila abortus and Chp3 in Chlamydop... Read More about Identification, sequencing and molecular analysis of Chp4, a novel chlamydiaphage of Chlamydophila abortus belonging to the family Microviridae.

Identification of a Divergent Environmental DNA Sequence Clade Using the Phylogeny of Gregarine Parasites (Apicomplexa) from Crustacean Hosts (2011)
Journal Article
Rueckert, S., Simdyanov, T. G., Aleoshin, V. V., & Leander, B. S. (2011). Identification of a Divergent Environmental DNA Sequence Clade Using the Phylogeny of Gregarine Parasites (Apicomplexa) from Crustacean Hosts. PLOS ONE, 6(3), Article e18163. https://doi.org/10.1371/journal.pone.0018163

Background

Environmental SSU rDNA surveys have significantly improved our understanding of microeukaryotic diversity. Many of the sequences acquired using this approach are closely related to lineages previously characterized at both morphologica... Read More about Identification of a Divergent Environmental DNA Sequence Clade Using the Phylogeny of Gregarine Parasites (Apicomplexa) from Crustacean Hosts.

Description of Trichotokara nothriae n. gen. et sp. (Apicomplexa, Lecudinidae) – An intestinal gregarine of Nothria conchylega (Polychaeta, Onuphidae) (2010)
Journal Article
Rueckert, S., & Leander, B. S. (2010). Description of Trichotokara nothriae n. gen. et sp. (Apicomplexa, Lecudinidae) – An intestinal gregarine of Nothria conchylega (Polychaeta, Onuphidae). Journal of Invertebrate Pathology, 104, 172-179. https://doi.org/10.1016/j.jip.2010.03.005

The trophozoites of a novel gregarine apicomplexan, Trichotokara nothriae n. gen. et sp., were isolated and characterized from the intestines of the onuphid tubeworm Nothria conchylega (Polychaeta), collected at 20 m depth from the North-eastern Paci... Read More about Description of Trichotokara nothriae n. gen. et sp. (Apicomplexa, Lecudinidae) – An intestinal gregarine of Nothria conchylega (Polychaeta, Onuphidae).

Starvation/stationary phase survival of Rhodococcus erythropolis SQ1: a physiological and genetic analysis (2008)
Thesis
Fanget, N. V. J. Starvation/stationary phase survival of Rhodococcus erythropolis SQ1: a physiological and genetic analysis. (Thesis). Napier University. Retrieved from http://researchrepository.napier.ac.uk/id/eprint/2432

Although the starvation or non-growth state is probably the most common physiological state of bacteria, it has been studied in relatively few organisms. In spite of its importance in pathogenesis, bioremediation and several industrial processes, lim... Read More about Starvation/stationary phase survival of Rhodococcus erythropolis SQ1: a physiological and genetic analysis.

Cooperative behaviour in cooperative breeders: Costs, benefits, and communal breeding. (2007)
Journal Article
Gilchrist, J. (2007). Cooperative behaviour in cooperative breeders: Costs, benefits, and communal breeding. Behavioural Processes, 76, 100-105. https://doi.org/10.1016/j.beproc.2006.12.013

[Critical review of: R. Bergmüller, R. Johnstone, A. Russell and R. Bshary, Integrating cooperative breeding into theoretical concepts of cooperation, Behav. Process. 76 (2) 2007: 61-72.] In this issue, Bergmüller et al., 2007 ... have provided a val... Read More about Cooperative behaviour in cooperative breeders: Costs, benefits, and communal breeding..

Characterisation of glutamine fructose-6-phosphate amidotransferase (EC 2.6.1.16) and N-acetylglucosamine metabolism in Bifidobacterium (2007)
Journal Article
Aïssi, E., Foley, S., Stolarczyk, E., Mouni, F., Brassart, C., Vidal, O., Aissi, E., Bouquelet, S., & Krzewinski, F. (2008). Characterisation of glutamine fructose-6-phosphate amidotransferase (EC 2.6.1.16) and N-acetylglucosamine metabolism in Bifidobacterium. Archives of Microbiology, 189(2), 157-167. https://doi.org/10.1007/s00203-007-0307-9

Bifidobacterium bifidum, in contrast to other bifido-bacterial species, is auxotrophic for N-acetylglucosamine. Growth experiments revealed assimilation of radiolabelled N-acetylglucosamine in bacterial cell walls and in acetate, an end-product of ce... Read More about Characterisation of glutamine fructose-6-phosphate amidotransferase (EC 2.6.1.16) and N-acetylglucosamine metabolism in Bifidobacterium.

Gordonia defluvii sp. nov., an actinomycete isolated from activated sludge foam. (2006)
Journal Article
Soddell, J. A., Stainsby, F. M., Eales, K. L., Seviour, R. J., & Goodfellow, M. (2006). Gordonia defluvii sp. nov., an actinomycete isolated from activated sludge foam. International Journal of Systematic and Evolutionary Microbiology, 56, 2265-2269. https://doi.org/10.1099/ijs.0.64034-0

Three strains of non-motile, Gram-positive, filamentous actinomycetes, isolates J4T, J5 and J59, initially recognized microscopically in activated sludge foam by their distinctive branching patterns, were isolated by micromanipulation. The taxonomic... Read More about Gordonia defluvii sp. nov., an actinomycete isolated from activated sludge foam..

Serum exposed to nanoparticle carbon black displays increased potential to induce macrophage migration (2004)
Journal Article
Barlow, P., Donaldson, K., MacCallum, J., Clouter, A., & Stone, V. (2005). Serum exposed to nanoparticle carbon black displays increased potential to induce macrophage migration. Toxicology Letters, 155(3), 397-401. https://doi.org/10.1016/j.toxlet.2004.11.006

Objective:
To assess whether fine and ultrafine particles (nanoparticles) have the capacity to activate factors in serum that would induce macrophage migration. This is a model previously reported to investigate complement activation by other respir... Read More about Serum exposed to nanoparticle carbon black displays increased potential to induce macrophage migration.

TNF-α induced DNA damage in primary murine hepatocytes (2003)
Journal Article
Chan, Y., Gillies, S., Ross, J., Harrison, D., Wheelhouse, N., Chan, Y., …Prost, S. (2003). TNF-α induced DNA damage in primary murine hepatocytes. International Journal of Molecular Medicine, 12(6), 889-894. doi:10.3892/ijmm.12.6.889

Hepatocellular carcinoma (HCC) is one of the most common cancers worldwide, usually arising from a background of chronic inflammatory disease. Tumor necrosis factor alpha (TNF-alpha) is a pro-inflammatory cytokine produced in response to tissue injur... Read More about TNF-α induced DNA damage in primary murine hepatocytes.

Analysis of the elements of catabolite repression in Clostridium acetobutylicum. (2003)
Journal Article
Tangney, M., Deutscher, J., Galinier, A., & Mitchell, W. J. (2003). Analysis of the elements of catabolite repression in Clostridium acetobutylicum. Journal of Molecular Microbiology and Biotechnology, 6, 6-11. https://doi.org/10.1159/000073403

The ptsH gene, encoding the phosphotransferase protein HPr, from Clostridium acetobutylicum ATCC 824 was identified from the genome sequence, cloned and shown to complement a ptsH mutant of Escherichia coli. The deduced protein sequence shares signif... Read More about Analysis of the elements of catabolite repression in Clostridium acetobutylicum..

DNA-Binding Activity of the Streptococcus thermophilus Phage Sfi21 Repressor (2002)
Journal Article
Bruttin, A., Foley, S., & Brüssow, H. (2002). DNA-Binding Activity of the Streptococcus thermophilus Phage Sfi21 Repressor. Virology, 303(1), 100-109. https://doi.org/10.1006/viro.2002.1574

The cloned Streptococcus thermophilus phage Sfi21 repressor open reading frame (orf) 127 gp protects a cell against superinfection with the homologous temperate, but not against virulent phages. As demonstrated by DNase protection assay and gel shift... Read More about DNA-Binding Activity of the Streptococcus thermophilus Phage Sfi21 Repressor.

Lactobacillus helveticus ATCC15009 as a host for native and conjugative plasmid DNA. (2002)
Book Chapter
Thompson, K., Collins, M. A., & Foley, S. (2002). Lactobacillus helveticus ATCC15009 as a host for native and conjugative plasmid DNA. In S. G. Pandalai (Ed.), Recent Research Developments in Plasmid Biology (55-74). Research Signpost/Transworld Research Network

The plasmid complement of Lactobacillus helveticus ATCC15009 (plasmids pLH1, pLH2 and pLH3) has been sequenced and is being analysed for functional properties. Sequences used include Accession Numbers X62150 (1-427), X72021 (21-2404 and 6891-10334),... Read More about Lactobacillus helveticus ATCC15009 as a host for native and conjugative plasmid DNA..

Transcription Mapping as a Tool in Phage Genomics: The Case of the Temperate Streptococcus thermophilus Phage Sfi21 (2002)
Journal Article
Ventura, M., Foley, S., Bruttin, A., Chennoufi, S. C., Canchaya, C., & Brüssow, H. (2002). Transcription Mapping as a Tool in Phage Genomics: The Case of the Temperate Streptococcus thermophilus Phage Sfi21. Virology, 296(1), 62-76. https://doi.org/10.1006/viro.2001.1331

For the lytic growth cycle of the temperate cos-site Streptococcus thermophilus phage Sfi21 a transcription map was developed on the basis of systematic Northern blot hybridizations. All deduced 5′ ends were confirmed by primer extension analysis. Th... Read More about Transcription Mapping as a Tool in Phage Genomics: The Case of the Temperate Streptococcus thermophilus Phage Sfi21.

Molecular cloning reveals the existence of a fourth γ subunit of the vertebrate brain GABAAreceptor (1993)
Journal Article
Harvey, R. J., Kim, H., & Darlison, M. G. (1993). Molecular cloning reveals the existence of a fourth γ subunit of the vertebrate brain GABAAreceptor. FEBS Letters, 331(3), 211-216. https://doi.org/10.1016/0014-5793%2893%2980339-v

We have isolated a cDNA, from the chicken, that encodes a fourth type of γ subunit of the vertebrate brain GABAA receptor. The mature polypeptide (which we name γ4) displays 67%, 69% and 70% identity, respectively, to the rat γ1, γ2 and γ3 subunits.... Read More about Molecular cloning reveals the existence of a fourth γ subunit of the vertebrate brain GABAAreceptor.

A novel invertebrate GABAAreceptor-like polypeptide Sequence and pattern of gene expression (1993)
Journal Article
Hutton, M. L., Harvey, R. J., Earley, F. G., Barnard, E. A., & Darlison, M. G. (1993). A novel invertebrate GABAAreceptor-like polypeptide Sequence and pattern of gene expression. FEBS Letters, 326(1-3), 112-116. https://doi.org/10.1016/0014-5793%2893%2981773-s

A full‐length complementary DNA has been isolated, from the fresh‐water mollusc Lymnaea stagnalis, that encodes a polypeptide (which we have named Ç) that exhibits between 30% and 40% identity to vertebrate GABAA and glycine receptor subunit sequence... Read More about A novel invertebrate GABAAreceptor-like polypeptide Sequence and pattern of gene expression.

Invertebrate GABA and glutamate receptors: molecular biology reveals predictable structures but some unusual pharmacologies (1992)
Journal Article
Darlison, M. G. (1992). Invertebrate GABA and glutamate receptors: molecular biology reveals predictable structures but some unusual pharmacologies. Trends in Neurosciences, 15(12), 469-474. https://doi.org/10.1016/0166-2236%2892%2990091-l

Determination of the sequences of invertebrate γ-aminobutyric acid (GABA)-gated and glutamate-gated receptor/ion channels, through the application of recombinant {DNA} methods, is not just an academic exercise to effect evolutionary comparisons with... Read More about Invertebrate GABA and glutamate receptors: molecular biology reveals predictable structures but some unusual pharmacologies.

Confirmation of the localization of the human GABAA receptor α1-subunit gene (GABRA1) to distal 5q by linkage analysis (1992)
Journal Article
Johnson, K. J., Sander, T., Hicks, A. A., van Marle, A., Janz, D., Mullan, M. J., …Darlison, M. G. (1992). Confirmation of the localization of the human GABAA receptor α1-subunit gene (GABRA1) to distal 5q by linkage analysis. Genomics, 14(3), 745-748. https://doi.org/10.1016/s0888-7543%2805%2980178-8

The GABAA receptor is the major inhibitory neurotransmitter receptor in the mammalian brain. To date, 14 genes that encode subunits of this receptor have been identified; these appear to be scattered throughout the human genome and are under investig... Read More about Confirmation of the localization of the human GABAA receptor α1-subunit gene (GABRA1) to distal 5q by linkage analysis.