Outputs (87)

Multiform Views of Multiple Trees (2008)
Presentation / Conference Contribution
Graham, M., & Kennedy, J. (2008). Multiform Views of Multiple Trees. In Proceedings of IV2008 (252-257). https://doi.org/10.1109/iv.2008.21

We describe a case study of TaxVis, a multiple view system for examining relationships between sets of multiple classification trees. The system displays multiform views of the dataset, which in turn can either be a singular view of the larger forest... Read More about Multiform Views of Multiple Trees.

Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation. (2008)
Presentation / Conference Contribution
Graham, M., Craig, P., & Kennedy, J. (2008, July). Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation. Presented at BNCOD 2008

All aspects of organismal biology rely on the accurate identification of specimens described and observed. This is particularly important for ecological surveys of biodiversity, where organisms must be identified and labelled, both for the purpose... Read More about Visualisation to Aid Biodiversity Studies through Accurate Taxonomic Reconciliation..

Concept relationship editor: a visual interface to support the assertion of synonymy relationships between taxonomic classifications (2008)
Presentation / Conference Contribution
Craig, P., & Kennedy, J. (2008, January). Concept relationship editor: a visual interface to support the assertion of synonymy relationships between taxonomic classifications. Presented at Visualization and Data Analysis 2008

An increasingly common approach being taken by taxonomists to define the relationships between taxa in alternative hierarchical classifications is to use a set-based notation which states relationship between two taxa from alternative classifications... Read More about Concept relationship editor: a visual interface to support the assertion of synonymy relationships between taxonomic classifications.

Developing a core ontology for taxonomic data. (2006)
Presentation / Conference Contribution
Kennedy, J., Gales, R., Hyam, R., Kukla, R., Wieczorek, J., Hagedorn, G., …Vieglais, D. (2006). Developing a core ontology for taxonomic data. In L. Belbin, A. Rissoné, & A. Weitzman (Eds.), Proceedings of TDWG (2006), St Louis, MI

Over recent years several sub-groups within the Taxonomic Databases Working Group (TDWG) have developed models and exchange standards to facilitate data sharing within the taxonomic community. These include ABCD, SDD, DwC, TCS and Spatial Data Standa... Read More about Developing a core ontology for taxonomic data..

Converting an existing taxonomic data resource to employ an ontology and LSIDs. (2006)
Presentation / Conference Contribution
Kennedy, J., Gales, R., & Kukla, R. (2006). Converting an existing taxonomic data resource to employ an ontology and LSIDs. In L. Belbin, A. Rissoné, & A. Weitzman (Eds.), Proceedings of TDWG (2006), St Louis, MI

Data sharing is fundamental to biodiversity and taxonomic data applications, however previous attempts at developing mechanisms to facilitate sharing within the community have had limited effect. Reasons for this include the lack of take up of data e... Read More about Converting an existing taxonomic data resource to employ an ontology and LSIDs..

Visual comparison and exploration of natural history collections (2006)
Presentation / Conference Contribution
Graham, M., Kennedy, J., & Downey, L. (2006, May). Visual comparison and exploration of natural history collections. Presented at Proceedings of the working conference on Advanced visual interfaces - AVI '06, Venice, Italy

Natural history museum collections contain a wealth of specimen level data that is now opening up for digital access. However, current interfaces to access and manipulate this data are standard text-based query mechanisms, giving no leeway for explor... Read More about Visual comparison and exploration of natural history collections.

Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration (2005)
Presentation / Conference Contribution
Kennedy, J., Kukla, R., & Paterson, T. (2005, July). Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration. Presented at Second International Workshop, DILS 2005

Biologists use scientific names to label the organisms described in their data; however, these names are not unique identifiers for taxonomic entities. Alternative taxonomic classifications may apply the same name, associated with alternative defi... Read More about Scientific names are ambiguous as identifiers for biological taxa: their context and definition are required for accurate data integration.

Coordinated parallel views for the exploratory analysis of microarray time-course data. (2005)
Presentation / Conference Contribution
Craig, P., Kennedy, J., & Cumming, A. (2005). Coordinated parallel views for the exploratory analysis of microarray time-course data. . https://doi.org/10.1109/CMV.2005.5

Microarray time-course data relate to the recorded activity of thousands of genes, in parallel, over multiple discrete points in time during a biological process. Existing techniques that attempt to support the exploratory analysis of this data rely... Read More about Coordinated parallel views for the exploratory analysis of microarray time-course data..

Exploring and examining assessment data via a matrix visualisation (2004)
Presentation / Conference Contribution
Graham, M., & Kennedy, J. (2004, May). Exploring and examining assessment data via a matrix visualisation. Presented at Proceedings of the working conference on Advanced visual interfaces - AVI '04, Gallipoli, Italy

OPAL (Online PArtner Lens) is an application designed to match project requirements with suitable teams and individuals, and as part of its matching process features an evaluation mechanism designed to elicit measures of trust between potential partn... Read More about Exploring and examining assessment data via a matrix visualisation.

Ontology-Driven Automated Generation of Data Entry Interfaces to Databases (2004)
Presentation / Conference Contribution
Cannon, A., Kennedy, J. B., Paterson, T., & Watson, M. F. (2004, July). Ontology-Driven Automated Generation of Data Entry Interfaces to Databases. Presented at Key Technologies for Data Management (Proc. BNCOD21): Lecture Notes in Computer Science 3112, Edinburgh, Scotland

This paper discusses an ontology based approach for the automatic generation of data entry interfaces to databases. An existing domain ontology is mapped to a system domain model, which a domain expert can then specialise using their domain expertise... Read More about Ontology-Driven Automated Generation of Data Entry Interfaces to Databases.