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Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data.

Craig, Paul; Cannon, Alan; Kennedy, Jessie; Kukla, Robert

Authors

Paul Craig



Contributors

Yuhua Luo
Editor

Abstract

This paper presents work to support collaborative visualisation and data analysis in the microarray time-series explorer (MaTSE) software. We introduce a novel visualisation component called the ‘pattern browser’ which is used to support the annotation and adjustment of user queries. This includes an explanation of why this component is required and how it can be used with our online pattern repository by biologists collaborating in the analysis of a microarray time-course data set. To conclude we suggest which other types of collaborative visualisation would benefit from the introduction of a component with comparable functionality.

Conference Name The 7th International Conference on Cooperative Design, Visualisation and Engineering
Start Date Sep 19, 2010
End Date Sep 22, 2010
Publication Date 2010
Deposit Date Feb 3, 2011
Publicly Available Date May 16, 2017
Peer Reviewed Peer Reviewed
Pages 199-206
Series Title Lecture Notes in Computer Science
Series Number 6240
Series ISSN 0302-9743
Book Title Cooperative Design, Visualization, and Engineering
ISBN 978-3642160653
DOI https://doi.org/10.1007/978-3-642-16066-0_30
Keywords Cooperative visualisation; combined multiple views; bioinformatics; microarray data analysis;
Public URL http://researchrepository.napier.ac.uk/id/eprint/3890
Publisher URL http://dx.doi.org/10.1007/978-3-642-16066-0_30
Contract Date May 16, 2017

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