Paul Craig
MaTSE: The microarray time-series explorer
Craig, Paul; Cannon, Alan; Kukla, Robert; Kennedy, Jessie
Authors
Dr Alan Cannon A.Cannon@napier.ac.uk
Research Fellow
Dr Robert Kukla R.Kukla@napier.ac.uk
Senior Research Fellow
Prof Jessie Kennedy J.Kennedy@napier.ac.uk
Enhanced Associate
Abstract
This paper describes the design, development and evaluation of the Microarray Time-Series Explorer (MaTSE), a novel information visualization application for the exploratory analysis of large scale microarray timeseries data. The software combines a variety of visualization and interaction techniques, which work together to allow biologists to explore their data and reveal patterns that would otherwise be impossible to find. These include a scatter-plot that can be animated to view different temporal intervals of the data, a multiple coordinated view framework to support the cross reference of multiple experimental conditions, a novel method for highlighting overlapping groups in the scatter-plot, and a pattern browser component that can be used with scatterplot box queries to support cooperative visualization.
Citation
Craig, P., Cannon, A., Kukla, R., & Kennedy, J. (2012). MaTSE: The microarray time-series explorer. In 2012 IEEE Symposium on Biological Data Visualization (BioVis) (41-48). https://doi.org/10.1109/biovis.2012.6378591
Conference Name | 2012 IEEE Symposium on Biological Data Visualization (BioVis) |
---|---|
Start Date | Oct 14, 2012 |
End Date | Oct 15, 2012 |
Publication Date | Dec 13, 2012 |
Deposit Date | Jan 16, 2013 |
Publicly Available Date | May 16, 2017 |
Publisher | Institute of Electrical and Electronics Engineers |
Peer Reviewed | Not Peer Reviewed |
Pages | 41-48 |
Book Title | 2012 IEEE Symposium on Biological Data Visualization (BioVis) |
ISBN | 9781467347303; 9781467347297 |
DOI | https://doi.org/10.1109/biovis.2012.6378591 |
Keywords | MaTSE; information visualization application; interaction techniques; microarray time series explorer; pattern browser; temporal intervals; visualization techniques; |
Public URL | http://researchrepository.napier.ac.uk/id/eprint/5793 |
Publisher URL | http://dx.doi.org/10.1109/BioVis.2012.6378591 |
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