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MaTSE: The microarray time-series explorer

Craig, Paul; Cannon, Alan; Kukla, Robert; Kennedy, Jessie

Authors

Paul Craig



Abstract

This paper describes the design, development and evaluation of the Microarray Time-Series Explorer (MaTSE), a novel information visualization application for the exploratory analysis of large scale microarray timeseries data. The software combines a variety of visualization and interaction techniques, which work together to allow biologists to explore their data and reveal patterns that would otherwise be impossible to find. These include a scatter-plot that can be animated to view different temporal intervals of the data, a multiple coordinated view framework to support the cross reference of multiple experimental conditions, a novel method for highlighting overlapping groups in the scatter-plot, and a pattern browser component that can be used with scatterplot box queries to support cooperative visualization.

Conference Name 2012 IEEE Symposium on Biological Data Visualization (BioVis)
Start Date Oct 14, 2012
End Date Oct 15, 2012
Publication Date Dec 13, 2012
Deposit Date Jan 16, 2013
Publicly Available Date May 16, 2017
Publisher Institute of Electrical and Electronics Engineers
Peer Reviewed Not Peer Reviewed
Pages 41-48
Book Title 2012 IEEE Symposium on Biological Data Visualization (BioVis)
ISBN 9781467347303; 9781467347297
DOI https://doi.org/10.1109/biovis.2012.6378591
Keywords MaTSE; information visualization application; interaction techniques; microarray time series explorer; pattern browser; temporal intervals; visualization techniques;
Public URL http://researchrepository.napier.ac.uk/id/eprint/5793
Publisher URL http://dx.doi.org/10.1109/BioVis.2012.6378591
Contract Date May 16, 2017

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