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BayesPiles: Visualisation Support for Bayesian Network Structure Learning (2018)
Journal Article
Vogogias, A., Kennedy, J., Archambault, D., Bach, B., Smith, V. A., & Currant, H. (2018). BayesPiles: Visualisation Support for Bayesian Network Structure Learning. ACM transactions on intelligent systems and technology, 10(1), Article 5. https://doi.org/10.1145/3230623

We address the problem of exploring, combining and comparing large collections of scored, directed networks for understanding inferred Bayesian networks used in biology. In this feld, heuristic algorithms explore the space of possible network solutio... Read More about BayesPiles: Visualisation Support for Bayesian Network Structure Learning.

TetraploidSNPMap: Software for Linkage Analysis and QTL Mapping in Autotetraploid Populations Using SNP Dosage Data (2017)
Journal Article
Hackett, C. A., Boskamp, B., Vogogias, A., Preedy, K. F., & Milne, I. (2017). TetraploidSNPMap: Software for Linkage Analysis and QTL Mapping in Autotetraploid Populations Using SNP Dosage Data. Journal of Heredity, 108(4), 438-442. https://doi.org/10.1093/jhered/esx022

An earlier software application of ours, TetraploidMap for Windows, enabled linkage analysis and quantitative trait locus interval mapping to be carried out in an experimental cross of an autotetraploid species, using both dominant markers such as am... Read More about TetraploidSNPMap: Software for Linkage Analysis and QTL Mapping in Autotetraploid Populations Using SNP Dosage Data.